SeqBench

Fetch DNA & Protein Sequences by Accession (NCBI / UniProt)

Paste a GenBank, RefSeq or UniProt accession and get the FASTA or GenBank record.

๐ŸŒ Looks up public records โ€” only the accession you enter is sent to NCBI / UniProt

Retrieve public DNA or protein records by accession number. Enter a GenBank/RefSeq ID (e.g. NM_000546) or a UniProt accession (e.g. P04637) and SeqBench retrieves the record from NCBI E-utilities or UniProt, shows the header and length, and lets you copy or download it as FASTA or GenBank. The lookup runs through SeqBench's server for reliability; only the public accession you enter is sent.

Examples:

How to use the Sequence Fetcher tool

  1. 1Type or paste an accession (e.g. NM_000546, NP_000537, P04637).
  2. 2Pick the database (or leave it on Auto-detect) and the output format (FASTA or GenBank).
  3. 3Click Fetch, then copy or download the record โ€” or paste it straight into another SeqBench tool.

Frequently asked questions

Which databases and IDs are supported?
NCBI Nucleotide (GenBank/RefSeq IDs such as NM_, NR_, XM_, NC_ and classic accessions), NCBI Protein (NP_, XP_, YP_, WP_โ€ฆ) and UniProtKB accessions (e.g. P04637). Auto-detect picks the right database from the accession format, or you can choose it manually.
Can I download GenBank format, not just FASTA?
Yes. For NCBI records you can fetch either FASTA or the full GenBank/GenPept flat file with its annotations. UniProt is served as FASTA.
Why does this tool use a server when everything else runs in my browser?
Browsers block most cross-origin requests to NCBI and UniProt, and NCBI rate-limits by client. Routing the lookup through SeqBench's server makes it work reliably and lets us identify the requester per NCBI's policy. Only the public accession is sent โ€” sequences you paste into other tools still never leave your browser.

Related references

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