SeqBench

Amino Acid Chart & Code Table — 20 Amino Acids

There are 20 standard amino acids encoded by the genetic code, each with a one-letter amino acid code and a three-letter abbreviation. This amino acid table lists every residue with its side-chain class, whether it is essential in the human diet, its average residue mass, Kyte–Doolittle hydropathy and the codons that encode it.

Amino acid code quick lookup

Use this compact amino acid code table to look up a one-letter code, three-letter abbreviation or full amino acid name.

A
Ala
Alanine
C
Cys
Cysteine
D
Asp
Aspartic acid
E
Glu
Glutamic acid
F
Phe
Phenylalanine
G
Gly
Glycine
H
His
Histidine
I
Ile
Isoleucine
K
Lys
Lysine
L
Leu
Leucine
M
Met
Methionine
N
Asn
Asparagine
P
Pro
Proline
Q
Gln
Glutamine
R
Arg
Arginine
S
Ser
Serine
T
Thr
Threonine
V
Val
Valine
W
Trp
Tryptophan
Y
Tyr
Tyrosine
Amino acid3-letter1-letterClassEssentialMass (Da)HydropathyCodons
AlanineAlaANonpolarNo71.1+1.8GCT, GCC, GCA, GCG
ArginineArgRBasicNo156.2-4.5CGT, CGC, CGA, CGG, AGA, AGG
AsparagineAsnNPolarNo114.1-3.5AAT, AAC
Aspartic acidAspDAcidicNo115.1-3.5GAT, GAC
CysteineCysCPolarNo103.1+2.5TGT, TGC
Glutamic acidGluEAcidicNo129.1-3.5GAA, GAG
GlutamineGlnQPolarNo128.1-3.5CAA, CAG
GlycineGlyGNonpolarNo57.1-0.4GGT, GGC, GGA, GGG
HistidineHisHBasicYes137.1-3.2CAT, CAC
IsoleucineIleINonpolarYes113.2+4.5ATT, ATC, ATA
LeucineLeuLNonpolarYes113.2+3.8TTA, TTG, CTT, CTC, CTA, CTG
LysineLysKBasicYes128.2-3.9AAA, AAG
MethionineMetMNonpolarYes131.2+1.9ATG
PhenylalaninePheFNonpolarYes147.2+2.8TTT, TTC
ProlineProPNonpolarNo97.1-1.6CCT, CCC, CCA, CCG
SerineSerSPolarNo87.1-0.8TCT, TCC, TCA, TCG, AGT, AGC
ThreonineThrTPolarYes101.1-0.7ACT, ACC, ACA, ACG
TryptophanTrpWNonpolarYes186.2-0.9TGG
TyrosineTyrYPolarNo163.2-1.3TAT, TAC
ValineValVNonpolarYes99.1+4.2GTT, GTC, GTA, GTG

NonpolarPolarAcidicBasic· Mass = average residue mass · Hydropathy = Kyte–Doolittle

Essential vs non-essential amino acids

Nine of the twenty amino acids are essential: the human body cannot synthesise them, so they must come from the diet — histidine, isoleucine, leucine, lysine, methionine, phenylalanine, threonine, tryptophan and valine. The remaining eleven are non-essential (or conditionally essential) and can be made from other metabolites.

Side-chain classes

Amino acids are grouped by the chemistry of their side chain. Nonpolarside chains are hydrophobic and tend to pack into a protein's core. Polar side chains are uncharged but hydrophilic. Acidic (Asp, Glu) carry a negative charge at neutral pH and basic(Lys, Arg, His) carry a positive charge — together they determine a protein's isoelectric point and net charge.

Frequently asked questions

How many amino acids are there?

There are 20 standard (proteinogenic) amino acids encoded directly by the genetic code. Two more — selenocysteine and pyrrolysine — are incorporated by special mechanisms in some organisms.

What are the essential amino acids?

The nine amino acids the human body cannot make and must get from food are histidine, isoleucine, leucine, lysine, methionine, phenylalanine, threonine, tryptophan and valine.

What is the difference between the one-letter and three-letter codes?

Both name the same amino acid. Three-letter codes (e.g. Ala, Gly) are easier to read; one-letter codes (e.g. A, G) are compact and used in sequence files and most software, including SeqBench.

What are the one-letter codes for amino acids?

The standard one-letter amino acid codes are A Ala, R Arg, N Asn, D Asp, C Cys, Q Gln, E Glu, G Gly, H His, I Ile, L Leu, K Lys, M Met, F Phe, P Pro, S Ser, T Thr, W Trp, Y Tyr and V Val.

What amino acids do Q, E, N and K stand for?

Q is glutamine, E is glutamate (glutamic acid), N is asparagine and K is lysine. These single-letter codes are used in protein sequences and amino acid tables.

What do nonpolar, polar, acidic and basic mean?

They classify the amino acid's side chain. Nonpolar side chains are hydrophobic; polar ones are uncharged but hydrophilic; acidic side chains carry a negative charge at neutral pH; basic ones carry a positive charge.

What is hydropathy?

Hydropathy (here the Kyte–Doolittle scale) measures how hydrophobic an amino acid is. Positive values are hydrophobic (water-avoiding), negative values hydrophilic. Averaged over a protein it gives the GRAVY score.

See also

Related tools and references

Use these related pages when this table raises a practical calculation or workflow question.